PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010094455.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 611aa    MW: 69637 Da    PI: 4.7348
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010094455.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011300320222
                     EETTTTEEESSHHHHHHHHHH CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt 22 
                      C  Cgk F++  + k+H ++
  XP_010094455.1 300 YCVVCGKKFKSEKQWKNHEQS 320
                     5*****************876 PP

2zf-C2H212.10.00061583600320
                     ETTTTEEESSHHHHHHHH CS
         zf-C2H2   3 CpdCgksFsrksnLkrHi 20 
                     C++Cg+ F +k  L++H+
  XP_010094455.1 583 CEKCGEEFESKNKLHKHL 600
                     *****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.287.1103.3E-24580IPR001623DnaJ domain
SuperFamilySSF465654.32E-23686IPR001623DnaJ domain
SMARTSM002714.0E-24870IPR001623DnaJ domain
CDDcd062571.52E-18967IPR001623DnaJ domain
PROSITE profilePS5007619.992978IPR001623DnaJ domain
PfamPF002266.1E-221075IPR001623DnaJ domain
PRINTSPR006259.7E-161129IPR001623DnaJ domain
PRINTSPR006259.7E-162944IPR001623DnaJ domain
PRINTSPR006259.7E-165070IPR001623DnaJ domain
PROSITE patternPS0063605574IPR018253DnaJ domain, conserved site
SuperFamilySSF576676.82E-13291337No hitNo description
SMARTSM004511.5E-5296330IPR003604Zinc finger, U1-type
PfamPF121712.7E-10299324IPR022755Zinc finger, double-stranded RNA binding
SMARTSM003550.43299323IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280301323IPR007087Zinc finger, C2H2
PROSITE profilePS501579.245581610IPR007087Zinc finger, C2H2
SMARTSM003553.2581605IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280583605IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MAAASGRRCH YEVLGLRRES TADEIRSAYK KLALQLHPDK LVQSGLSQSE ATARFQELSQ  60
AYEVLSDPKE RAWYDSHRSQ ILFADPNSAD SVPDSVIPNL FSFFSNSVFS GYSDTGKGFY  120
KVYSDVFSKI YANELSFASK LGLGLDAVRE APAMGNLESP YTQVTAFYGY WLGFSTVMDF  180
CWVDQYDAMA GVNRKSRRVM EEENKKLRKK ARREYNETVR GLAEFVKKRD KRVIDMAVKK  240
NLGMEKRREE ERERKNKMER ERLERAMAYE EPEWSRIGEE EEAEEEENVV EEVEEKKELY  300
CVVCGKKFKS EKQWKNHEQS KKHREKVAEF RESVGDEEFE DDLEGEDGDE KDGEVEELEE  360
KMRDGFRIGE EEEVELSNGD DDEFGEVGAA NGVDEDGEKV GFDAEDDEDG ENADNGDDDT  420
VDDEIGVLEA MLGRRRNRKK NGSLPETNGT LNSINVHVEN DDNDDDDDDF MDYNKRKTTR  480
RNRRARKERS GKNGEEAGVS RSEKSKESNG DENLHHQEES SSRSVAENES NGKEDDLLAD  540
NKKSSNQHVD KKGKAKNDTN AKSKNSSRGK KAKATSKNSS NACEKCGEEF ESKNKLHKHL  600
TDTGHATLKC R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204212KKLRKKARR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010094455.10.0DnaJ homolog subfamily C member 21
SwissprotQ9C9110.0JJJ1_ARATH; DNAJ protein JJJ1 homolog
TrEMBLW9QWL20.0W9QWL2_9R
STRINGGLYMA05G00445.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65511922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.11e-143DNAJ heat shock N-terminal domain-containing protein